PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008240829.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 351aa    MW: 38845.8 Da    PI: 6.3593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008240829.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08196243455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN ++  L+el+P +    +k    a +L + +++++sLq
  XP_008240829.1 196 NHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDEIINHVQSLQ 243
                     79************************9....888999999999999999998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000838.22E-9190247No hitNo description
SuperFamilySSF474592.62E-15190261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.0E-14192260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.469192242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-6196243IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-8198248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MDPTGATVPG SILPGPEFES LQFREEIHRL MAVPPENASS FTALLELPPT QAMELLHLSP  60
EANSTPTPAA MSGEARVQHP FNSSLTFPTN PALIERAAKF SIFAGEGSPE TSSMPSNSGA  120
DLEKVKTEPV ETDSNPNSSQ LTLDATKNNQ RSSAKRKERE KKVKLSTKKS KSEIKEDADK  180
VPYVHVRARR GQATDNHSLA ERARREKINA RMKLLQELVP GCNKISGTAL VLDEIINHVQ  240
SLQRQVEFLS MRLAAVNPRI DFNLDSILAA ESGSLMEANF ANMVTPLMWP EVPINGNRQP  300
YHQQWHFDTN QPGWGREEET HTFITPETSL ISCDSSANSA TLQRSHLKME M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008240829.10.0PREDICTED: transcription factor bHLH48-like
SwissprotQ8VZ021e-104BH048_ARATH; Transcription factor bHLH48
TrEMBLM5VYC80.0M5VYC8_PRUPE; Uncharacterized protein
STRINGGLYMA19G32570.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-104bHLH family protein